Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RIPK2O43353 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RIPK2O43353 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RIPK2O43353 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 KRT8P47-201ENST00000604727 1398 ntBASIC18.04■□□□□ 0.48
RIPK2O43353 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 AL139384.1-201ENST00000612143 3047 ntBASIC18.04■□□□□ 0.48
RIPK2O43353 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.04■□□□□ 0.48
RIPK2O43353 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 LYSMD4-203ENST00000378904 2122 ntBASIC18.04■□□□□ 0.48
RIPK2O43353 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.04■□□□□ 0.48
RIPK2O43353 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.04■□□□□ 0.48
RIPK2O43353 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RIPK2O43353 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RIPK2O43353 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.04■□□□□ 0.48
RIPK2O43353 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RIPK2O43353 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RIPK2O43353 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.03■□□□□ 0.48
RIPK2O43353 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.03■□□□□ 0.48
RIPK2O43353 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.03■□□□□ 0.48
RIPK2O43353 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.03■□□□□ 0.48
RIPK2O43353 BX088651.1-201ENST00000540551 451 ntBASIC18.03■□□□□ 0.48
RIPK2O43353 MIR4651-201ENST00000582622 73 ntBASIC18.03■□□□□ 0.48
RIPK2O43353 AC113410.3-201ENST00000623366 203 ntBASIC18.03■□□□□ 0.48
RIPK2O43353 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.03■□□□□ 0.48
RIPK2O43353 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 AC046158.3-201ENST00000624947 2558 ntBASIC18.03■□□□□ 0.48
RIPK2O43353 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.03■□□□□ 0.48
RIPK2O43353 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.03■□□□□ 0.48
RIPK2O43353 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RIPK2O43353 AC116353.5-201ENST00000638148 1699 ntBASIC18.03■□□□□ 0.48
RIPK2O43353 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.02■□□□□ 0.48
RIPK2O43353 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.02■□□□□ 0.48
RIPK2O43353 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 ABHD17AP1-201ENST00000358206 933 ntBASIC18.02■□□□□ 0.48
RIPK2O43353 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.02■□□□□ 0.48
RIPK2O43353 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.02■□□□□ 0.48
RIPK2O43353 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RIPK2O43353 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.02■□□□□ 0.47
RIPK2O43353 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms