Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC7O00311 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.45■□□□□ 0.38
CDC7O00311 HLA-J-201ENST00000462773 1622 ntBASIC17.45■□□□□ 0.38
CDC7O00311 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC7O00311 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC7O00311 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDC7O00311 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDC7O00311 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC7O00311 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 SIRPAP1-201ENST00000448467 1770 ntBASIC17.44■□□□□ 0.38
CDC7O00311 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.44■□□□□ 0.38
CDC7O00311 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC7O00311 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC7O00311 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC7O00311 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.44■□□□□ 0.38
CDC7O00311 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.44■□□□□ 0.38
CDC7O00311 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.44■□□□□ 0.38
CDC7O00311 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDC7O00311 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC7O00311 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC7O00311 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC7O00311 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDC7O00311 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDC7O00311 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDC7O00311 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDC7O00311 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDC7O00311 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDC7O00311 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.43■□□□□ 0.38
CDC7O00311 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CDC7O00311 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 AL138688.1-201ENST00000624851 1594 ntBASIC17.43■□□□□ 0.38
CDC7O00311 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDC7O00311 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC7O00311 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDC7O00311 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDC7O00311 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC7O00311 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC7O00311 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 CROCCP2-202ENST00000412962 2773 ntBASIC17.42■□□□□ 0.38
CDC7O00311 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDC7O00311 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC7O00311 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC7O00311 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC7O00311 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.42■□□□□ 0.38
CDC7O00311 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 KRT18P21-201ENST00000515767 1272 ntBASIC17.42■□□□□ 0.38
CDC7O00311 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC7O00311 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 LINC01451-201ENST00000623792 534 ntBASIC17.42■□□□□ 0.38
CDC7O00311 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.42■□□□□ 0.38
CDC7O00311 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CDC7O00311 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDC7O00311 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC7O00311 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC7O00311 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC7O00311 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms