Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC002558.1-201ENST00000488906 803 ntBASIC17.38■□□□□ 0.37
EIF3FO00303 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.38■□□□□ 0.37
EIF3FO00303 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.38■□□□□ 0.37
EIF3FO00303 AL138831.2-201ENST00000606564 490 ntBASIC17.38■□□□□ 0.37
EIF3FO00303 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EIF3FO00303 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.38■□□□□ 0.37
EIF3FO00303 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 AC016734.2-201ENST00000624325 1377 ntBASIC17.38■□□□□ 0.37
EIF3FO00303 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
EIF3FO00303 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
EIF3FO00303 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
EIF3FO00303 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.37■□□□□ 0.37
EIF3FO00303 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.37■□□□□ 0.37
EIF3FO00303 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.37■□□□□ 0.37
EIF3FO00303 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.37■□□□□ 0.37
EIF3FO00303 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.37■□□□□ 0.37
EIF3FO00303 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 AL845331.1-201ENST00000424978 1190 ntBASIC17.37■□□□□ 0.37
EIF3FO00303 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.37■□□□□ 0.37
EIF3FO00303 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.37■□□□□ 0.37
EIF3FO00303 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.37■□□□□ 0.37
EIF3FO00303 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.37■□□□□ 0.37
EIF3FO00303 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.37■□□□□ 0.37
EIF3FO00303 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.37■□□□□ 0.37
EIF3FO00303 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.37■□□□□ 0.37
EIF3FO00303 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.37■□□□□ 0.37
EIF3FO00303 AP000550.4-202ENST00000639755 178 ntBASIC17.37■□□□□ 0.37
EIF3FO00303 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.37■□□□□ 0.37
EIF3FO00303 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.37■□□□□ 0.37
EIF3FO00303 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
EIF3FO00303 IER3-202ENST00000376377 1350 ntBASIC17.37■□□□□ 0.37
EIF3FO00303 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EIF3FO00303 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
EIF3FO00303 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EIF3FO00303 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
EIF3FO00303 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.36■□□□□ 0.37
EIF3FO00303 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.36■□□□□ 0.37
EIF3FO00303 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.36■□□□□ 0.37
EIF3FO00303 AC122714.2-201ENST00000502787 707 ntBASIC17.36■□□□□ 0.37
EIF3FO00303 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.36■□□□□ 0.37
EIF3FO00303 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.36■□□□□ 0.37
EIF3FO00303 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.36■□□□□ 0.37
EIF3FO00303 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.36■□□□□ 0.37
EIF3FO00303 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EIF3FO00303 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EIF3FO00303 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
EIF3FO00303 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
EIF3FO00303 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
EIF3FO00303 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.35■□□□□ 0.37
EIF3FO00303 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EIF3FO00303 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.35■□□□□ 0.37
EIF3FO00303 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.35■□□□□ 0.37
EIF3FO00303 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
EIF3FO00303 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EIF3FO00303 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
EIF3FO00303 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EIF3FO00303 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EIF3FO00303 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EIF3FO00303 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.35■□□□□ 0.37
EIF3FO00303 DRAXINP1-201ENST00000437611 948 ntBASIC17.35■□□□□ 0.37
EIF3FO00303 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EIF3FO00303 TSSC2-201ENST00000450217 709 ntBASIC17.35■□□□□ 0.37
EIF3FO00303 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.35■□□□□ 0.37
EIF3FO00303 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.35■□□□□ 0.37
EIF3FO00303 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.35■□□□□ 0.37
EIF3FO00303 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
EIF3FO00303 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms