Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC188H7C350 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC188H7C350 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC188H7C350 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC188H7C350 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC188H7C350 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC188H7C350 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC188H7C350 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC188H7C350 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC188H7C350 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC188H7C350 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC188H7C350 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC188H7C350 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC188H7C350 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 UNC93B2-201ENST00000285383 730 ntBASIC18.47■□□□□ 0.55
CCDC188H7C350 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 PVRIG2P-201ENST00000435460 978 ntBASIC18.47■□□□□ 0.55
CCDC188H7C350 KRT18P65-201ENST00000439811 1286 ntBASIC18.47■□□□□ 0.55
CCDC188H7C350 MIR3917-201ENST00000580971 93 ntBASIC18.47■□□□□ 0.55
CCDC188H7C350 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC188H7C350 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC188H7C350 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC188H7C350 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC188H7C350 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC188H7C350 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC188H7C350 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC188H7C350 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC188H7C350 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC188H7C350 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC188H7C350 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 KRT8P47-201ENST00000604727 1398 ntBASIC18.46■□□□□ 0.55
CCDC188H7C350 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC188H7C350 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC188H7C350 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC188H7C350 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC188H7C350 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC188H7C350 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC188H7C350 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 AC105020.1-201ENST00000435356 2205 ntBASIC18.46■□□□□ 0.55
CCDC188H7C350 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC188H7C350 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC188H7C350 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.54
CCDC188H7C350 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 AC060834.1-201ENST00000443027 2032 ntBASIC18.45■□□□□ 0.54
CCDC188H7C350 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC188H7C350 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC188H7C350 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC188H7C350 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
CCDC188H7C350 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC188H7C350 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC188H7C350 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC188H7C350 LYSMD4-203ENST00000378904 2122 ntBASIC18.45■□□□□ 0.54
CCDC188H7C350 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC188H7C350 AC005104.2-201ENST00000427818 678 ntBASIC18.45■□□□□ 0.54
CCDC188H7C350 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC188H7C350 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC188H7C350 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.45■□□□□ 0.54
CCDC188H7C350 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC188H7C350 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms