Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 HNRNPDP1-201ENST00000439535 754 ntBASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC025062.2-201ENST00000605477 670 ntBASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC009949.1-201ENST00000623048 1830 ntBASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 HLA-J-201ENST00000462773 1622 ntBASIC17.76■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 BX005266.1-201ENST00000473402 457 ntBASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AL049840.3-201ENST00000602669 611 ntBASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC073592.4-201ENST00000623827 446 ntBASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AP000997.3-201ENST00000623333 2250 ntBASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC243591.1-201ENST00000452967 1364 ntBASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AL353593.2-201ENST00000602529 1483 ntBASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AL020996.1-203ENST00000536896 2307 ntBASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.75■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 SIGLEC16-201ENST00000599858 1437 ntBASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 KRT18P55-202ENST00000578578 1546 ntBASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 SPDYE21P-201ENST00000413323 827 ntBASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 LAGE3P1-201ENST00000425356 484 ntBASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms