Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GOLGA6L4A6NEF3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GOLGA6L4A6NEF3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GOLGA6L4A6NEF3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GOLGA6L4A6NEF3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GOLGA6L4A6NEF3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 AP000525.1-201ENST00000608286 694 ntBASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 AC116407.2-201ENST00000613639 860 ntBASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 CROCCP2-202ENST00000412962 2773 ntBASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GOLGA6L4A6NEF3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.53■□□□□ 0.88
GOLGA6L4A6NEF3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 AL390955.1-201ENST00000428694 934 ntBASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 FITM1-202ENST00000559294 800 ntBASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 Z99916.2-201ENST00000604037 246 ntBASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 AC010653.2-201ENST00000623505 997 ntBASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
GOLGA6L4A6NEF3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
GOLGA6L4A6NEF3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
GOLGA6L4A6NEF3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
GOLGA6L4A6NEF3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.87
GOLGA6L4A6NEF3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
GOLGA6L4A6NEF3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GOLGA6L4A6NEF3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 AC084018.2-201ENST00000613093 2607 ntBASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GOLGA6L4A6NEF3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms