Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 DDX43P3-201ENST00000441064 443 ntBASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 RN7SL606P-201ENST00000472779 293 ntBASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 GUSBP12-201ENST00000513727 720 ntBASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC162PA2VCL2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 KRT8P26-201ENST00000534154 1276 ntBASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 AL592071.1-201ENST00000611956 408 ntBASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 AL139384.1-201ENST00000612143 3047 ntBASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC162PA2VCL2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC162PA2VCL2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC162PA2VCL2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC162PA2VCL2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC162PA2VCL2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CCDC162PA2VCL2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
CCDC162PA2VCL2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 REXO1L11P-201ENST00000620964 1927 ntBASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 AC116407.4-201ENST00000623319 1061 ntBASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 AC124864.1-201ENST00000623408 392 ntBASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC162PA2VCL2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms