Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
SYCE3A1L190 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SYCE3A1L190 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYCE3A1L190 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.24■□□□□ 0.83
SYCE3A1L190 SLC25A1P4-201ENST00000567977 778 ntBASIC20.24■□□□□ 0.83
SYCE3A1L190 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.24■□□□□ 0.83
SYCE3A1L190 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.24■□□□□ 0.83
SYCE3A1L190 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYCE3A1L190 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYCE3A1L190 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.24■□□□□ 0.83
SYCE3A1L190 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.24■□□□□ 0.83
SYCE3A1L190 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SYCE3A1L190 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.24■□□□□ 0.83
SYCE3A1L190 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.24■□□□□ 0.83
SYCE3A1L190 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.24■□□□□ 0.83
SYCE3A1L190 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SYCE3A1L190 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.23■□□□□ 0.83
SYCE3A1L190 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.23■□□□□ 0.83
SYCE3A1L190 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SYCE3A1L190 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SYCE3A1L190 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.23■□□□□ 0.83
SYCE3A1L190 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.23■□□□□ 0.83
SYCE3A1L190 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 AC022898.2-201ENST00000616822 1312 ntBASIC20.23■□□□□ 0.83
SYCE3A1L190 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYCE3A1L190 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SYCE3A1L190 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SYCE3A1L190 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SYCE3A1L190 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.22■□□□□ 0.83
SYCE3A1L190 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 RARRES2P10-201ENST00000564312 460 ntBASIC20.22■□□□□ 0.83
SYCE3A1L190 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.22■□□□□ 0.83
SYCE3A1L190 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 AL603756.1-201ENST00000606511 2163 ntBASIC20.22■□□□□ 0.83
SYCE3A1L190 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.22■□□□□ 0.83
SYCE3A1L190 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.22■□□□□ 0.83
SYCE3A1L190 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SYCE3A1L190 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYCE3A1L190 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
SYCE3A1L190 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SYCE3A1L190 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SYCE3A1L190 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SYCE3A1L190 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.21■□□□□ 0.83
SYCE3A1L190 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SYCE3A1L190 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.21■□□□□ 0.83
SYCE3A1L190 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.21■□□□□ 0.83
SYCE3A1L190 AC009065.1-201ENST00000564055 1225 ntBASIC20.21■□□□□ 0.83
SYCE3A1L190 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.21■□□□□ 0.83
SYCE3A1L190 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SYCE3A1L190 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYCE3A1L190 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms