Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 PCDHB19P-201ENST00000570871 2371 ntBASIC17.84■□□□□ 0.45
CCDC189A1A4V9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 LINC02228-204ENST00000642115 2962 ntBASIC17.84■□□□□ 0.45
CCDC189A1A4V9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC189A1A4V9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC189A1A4V9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC189A1A4V9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC189A1A4V9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC189A1A4V9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC189A1A4V9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC189A1A4V9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC189A1A4V9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCDC189A1A4V9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 AC108860.2-201ENST00000562760 2183 ntBASIC17.82■□□□□ 0.44
CCDC189A1A4V9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 MMP23A-201ENST00000234610 1017 ntBASIC17.82■□□□□ 0.44
CCDC189A1A4V9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 AC010947.1-201ENST00000623454 693 ntBASIC17.82■□□□□ 0.44
CCDC189A1A4V9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 HTR7P1-202ENST00000624664 4411 ntBASIC17.82■□□□□ 0.44
CCDC189A1A4V9 PCDHB17P-201ENST00000539533 2393 ntBASIC17.82■□□□□ 0.44
CCDC189A1A4V9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC189A1A4V9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms