Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM129A0AVI4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM129A0AVI4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.08■□□□□ 0.17
TMEM129A0AVI4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM129A0AVI4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM129A0AVI4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.08■□□□□ 0.17
TMEM129A0AVI4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.08■□□□□ 0.17
TMEM129A0AVI4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.08■□□□□ 0.16
TMEM129A0AVI4 FAM8A6P-201ENST00000407496 1135 ntBASIC16.08■□□□□ 0.16
TMEM129A0AVI4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 NEK4P2-201ENST00000580004 1012 ntBASIC16.08■□□□□ 0.16
TMEM129A0AVI4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 HOXB1-202ENST00000577092 1414 ntBASIC16.08■□□□□ 0.16
TMEM129A0AVI4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TMEM129A0AVI4 LINC00304-203ENST00000565008 1864 ntBASIC16.08■□□□□ 0.16
TMEM129A0AVI4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM129A0AVI4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 HLA-J-201ENST00000462773 1622 ntBASIC16.06■□□□□ 0.16
TMEM129A0AVI4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms