Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 DGCR10-201ENST00000609839 495 ntBASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 CR769767.2-201ENST00000622735 460 ntBASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 SLC25A1P4-201ENST00000567977 778 ntBASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 AC112497.1-201ENST00000624824 639 ntBASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV3S1A0A5B6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 LINC02012-201ENST00000608206 1725 ntBASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 AC078925.2-201ENST00000624013 1973 ntBASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 LINC01311-201ENST00000565162 1445 ntBASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV3S1A0A5B6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms