Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 CROCCP2-202ENST00000412962 2773 ntBASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 AC009949.1-201ENST00000623048 1830 ntBASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00959A0A1B0GUT2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 AP001094.4-201ENST00000579008 2176 ntBASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 AC034232.1-201ENST00000506026 1064 ntBASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00959A0A1B0GUT2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 AD000864.1-201ENST00000624076 2295 ntBASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00959A0A1B0GUT2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms