Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IGKV2-28A0A075B6P5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 KRT8P50-201ENST00000562022 1438 ntBASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 SDHAP2-201ENST00000455183 2001 ntBASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
IGKV2-28A0A075B6P5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 AL353807.1-201ENST00000427475 662 ntBASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 PPP1R14BP5-201ENST00000440334 435 ntBASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 AL031985.4-201ENST00000642138 673 ntBASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.77□□□□□ -0.53
IGKV2-28A0A075B6P5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
IGKV2-28A0A075B6P5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms