Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 MIR1233-2-201ENST00000408138 82 ntBASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 MIR1233-1-201ENST00000408722 82 ntBASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 MINOS1P3-201ENST00000457048 203 ntBASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB9Q9Y5E1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 AC100803.2-201ENST00000562459 1963 ntBASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 AC091607.1-201ENST00000490318 1060 ntBASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 KRT18P58-201ENST00000527480 1120 ntBASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 REXO1L6P-202ENST00000619970 1078 ntBASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB9Q9Y5E1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 IGHV3-47-201ENST00000425060 335 ntBASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 FAM197Y8-203ENST00000450145 560 ntBASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 AP005901.3-202ENST00000581653 237 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms