Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 AC145285.6-201ENST00000604632 637 ntBASIC16.69■□□□□ 0.26
IFT52Q9Y366 AL157888.1-201ENST00000631930 593 ntBASIC16.69■□□□□ 0.26
IFT52Q9Y366 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
IFT52Q9Y366 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 AD000864.1-201ENST00000624076 2295 ntBASIC16.68■□□□□ 0.26
IFT52Q9Y366 AC132938.6-201ENST00000623828 1655 ntBASIC16.68■□□□□ 0.26
IFT52Q9Y366 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT52Q9Y366 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT52Q9Y366 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 AC113404.2-201ENST00000507884 177 ntBASIC16.67■□□□□ 0.26
IFT52Q9Y366 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 AL031432.5-201ENST00000641059 760 ntBASIC16.67■□□□□ 0.26
IFT52Q9Y366 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT52Q9Y366 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IFT52Q9Y366 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms