Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 AC211476.1-201ENST00000503899 468 ntBASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 AC092364.2-202ENST00000597012 1073 ntBASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 AC004790.2-201ENST00000623588 572 ntBASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 AL020996.1-203ENST00000536896 2307 ntBASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 MKNK2P1-201ENST00000437526 628 ntBASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC26.22■■□□□ 1.79
SHANK2Q9UPX8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 PTCHD3P3-201ENST00000403073 906 ntBASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 RHOQP3-201ENST00000437982 621 ntBASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 HLA-J-203ENST00000494367 1087 ntBASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 CD63-210ENST00000550776 870 ntTSL 5 BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 AC097637.2-201ENST00000624096 1997 ntBASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC26.21■■□□□ 1.79
SHANK2Q9UPX8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SHANK2Q9UPX8 AL590787.1-201ENST00000568856 1315 ntBASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 PC-214ENST00000628663 1470 ntTSL 5 BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SHANK2Q9UPX8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 REXO1L11P-201ENST00000620964 1927 ntBASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 C20orf181-201ENST00000623918 480 ntBASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHANK2Q9UPX8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms