Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 IGHV3-47-201ENST00000425060 335 ntBASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 AC002558.1-201ENST00000488906 803 ntBASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGC3Q9UN70 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 KRT17P6-201ENST00000453795 1220 ntBASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 AC011467.2-201ENST00000598425 242 ntBASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGC3Q9UN70 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 FAM220CP-201ENST00000395253 831 ntBASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 LINC00265-3P-201ENST00000447588 903 ntBASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 AC019129.2-201ENST00000609837 1235 ntBASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGC3Q9UN70 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 NSUN5P1-202ENST00000421140 1535 ntBASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 NSUN5P2-203ENST00000457352 1529 ntBASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGC3Q9UN70 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms