Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CLIP2Q9UDT6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 RCN1P2-201ENST00000398357 915 ntBASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 AC104692.2-201ENST00000603054 253 ntBASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 TP73-AS1-210ENST00000637775 1455 ntBASIC21.07■□□□□ 0.96
CLIP2Q9UDT6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 AKR1C7P-201ENST00000305623 895 ntBASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIP2Q9UDT6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 FDX1P1-201ENST00000449115 551 ntBASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 AL138831.2-201ENST00000606564 490 ntBASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 AC114341.1-201ENST00000618070 349 ntBASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIP2Q9UDT6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 AC125634.1-201ENST00000438758 1403 ntBASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIP2Q9UDT6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms