Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 AL049597.2-201ENST00000565575 961 ntBASIC14.74□□□□□ -0.05
CALYQ9NYX4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.74□□□□□ -0.05
CALYQ9NYX4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CALYQ9NYX4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 AL355312.1-201ENST00000407115 2176 ntBASIC14.73□□□□□ -0.05
CALYQ9NYX4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 MTCL1P1-201ENST00000446207 792 ntBASIC14.73□□□□□ -0.05
CALYQ9NYX4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.73□□□□□ -0.05
CALYQ9NYX4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CALYQ9NYX4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 FAM210CP-201ENST00000445714 574 ntBASIC14.72□□□□□ -0.05
CALYQ9NYX4 AC068472.1-201ENST00000474589 881 ntBASIC14.72□□□□□ -0.05
CALYQ9NYX4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CALYQ9NYX4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CALYQ9NYX4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CALYQ9NYX4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CALYQ9NYX4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CALYQ9NYX4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CALYQ9NYX4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms