Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 KRT17P6-201ENST00000453795 1220 ntBASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 AC019129.2-201ENST00000609837 1235 ntBASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 BNIP3P18-201ENST00000593976 575 ntBASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 AC093458.2-201ENST00000623150 629 ntBASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 AL645608.8-201ENST00000606034 2086 ntBASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.74■□□□□ 0.75
BLOC1S4Q9NUP1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 NSUN5P1-202ENST00000421140 1535 ntBASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 NSUN5P2-203ENST00000457352 1529 ntBASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 AC141586.5-201ENST00000624546 2050 ntBASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 AL138688.1-201ENST00000624851 1594 ntBASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BLOC1S4Q9NUP1 SIRPAP1-201ENST00000448467 1770 ntBASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms