Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 KRT8P41-201ENST00000533985 1514 ntBASIC16.96■□□□□ 0.31
VCX3BQ9H321 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 AC023824.1-201ENST00000562945 2975 ntBASIC16.96■□□□□ 0.31
VCX3BQ9H321 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VCX3BQ9H321 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
VCX3BQ9H321 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VCX3BQ9H321 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VCX3BQ9H321 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
VCX3BQ9H321 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VCX3BQ9H321 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VCX3BQ9H321 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 AC006557.6-201ENST00000623071 864 ntBASIC16.94■□□□□ 0.3
VCX3BQ9H321 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 LINC00304-203ENST00000565008 1864 ntBASIC16.94■□□□□ 0.3
VCX3BQ9H321 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms