Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH11XQ9BZA7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH11XQ9BZA7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH11XQ9BZA7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 FAM58CP-201ENST00000435741 640 ntBASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 AP000344.2-201ENST00000512987 629 ntBASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 MIR3197-201ENST00000582241 73 ntBASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH11XQ9BZA7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH11XQ9BZA7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 ACTG1P14-201ENST00000446382 1122 ntBASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH11XQ9BZA7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms