Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 AL353708.3-201ENST00000610272 989 ntBASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NDUFAF3Q9BU61 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 PKD1P5-201ENST00000532415 10291 ntBASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 FEM1AP3-201ENST00000403722 1741 ntBASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 AL355075.4-201ENST00000554988 638 ntBASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 AL023806.1-201ENST00000603994 1649 ntBASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFAF3Q9BU61 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 IRX1P1-201ENST00000438849 1838 ntBASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms