Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ARID3AQ99856 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.27■□□□□ 0.84
ARID3AQ99856 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.27■□□□□ 0.84
ARID3AQ99856 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.27■□□□□ 0.84
ARID3AQ99856 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ARID3AQ99856 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.27■□□□□ 0.83
ARID3AQ99856 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ARID3AQ99856 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
ARID3AQ99856 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.27■□□□□ 0.83
ARID3AQ99856 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ARID3AQ99856 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.27■□□□□ 0.83
ARID3AQ99856 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ARID3AQ99856 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 AC093525.10-201ENST00000625130 1569 ntBASIC20.26■□□□□ 0.83
ARID3AQ99856 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ARID3AQ99856 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.26■□□□□ 0.83
ARID3AQ99856 AC008622.2-201ENST00000617006 1229 ntBASIC20.26■□□□□ 0.83
ARID3AQ99856 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.26■□□□□ 0.83
ARID3AQ99856 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.26■□□□□ 0.83
ARID3AQ99856 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARID3AQ99856 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ARID3AQ99856 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.25■□□□□ 0.83
ARID3AQ99856 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ARID3AQ99856 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ARID3AQ99856 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.25■□□□□ 0.83
ARID3AQ99856 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.25■□□□□ 0.83
ARID3AQ99856 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.25■□□□□ 0.83
ARID3AQ99856 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.25■□□□□ 0.83
ARID3AQ99856 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.25■□□□□ 0.83
ARID3AQ99856 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
ARID3AQ99856 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 KRT8P3-201ENST00000519669 1449 ntBASIC20.25■□□□□ 0.83
ARID3AQ99856 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARID3AQ99856 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ARID3AQ99856 AL136379.1-201ENST00000623471 2642 ntBASIC20.24■□□□□ 0.83
ARID3AQ99856 CYP2D8P-201ENST00000433633 1490 ntBASIC20.24■□□□□ 0.83
ARID3AQ99856 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ARID3AQ99856 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.24■□□□□ 0.83
ARID3AQ99856 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.24■□□□□ 0.83
ARID3AQ99856 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
ARID3AQ99856 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.24■□□□□ 0.83
ARID3AQ99856 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.24■□□□□ 0.83
ARID3AQ99856 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.24■□□□□ 0.83
ARID3AQ99856 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
ARID3AQ99856 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.24■□□□□ 0.83
ARID3AQ99856 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 AC079328.2-201ENST00000561241 3354 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms