Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD9AQ99638 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.89■□□□□ 0.61
RAD9AQ99638 BCRP1-201ENST00000444246 691 ntBASIC18.89■□□□□ 0.61
RAD9AQ99638 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RAD9AQ99638 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.89■□□□□ 0.61
RAD9AQ99638 AC023141.13-201ENST00000604991 943 ntBASIC18.89■□□□□ 0.61
RAD9AQ99638 AL513210.1-201ENST00000629608 234 ntBASIC18.89■□□□□ 0.61
RAD9AQ99638 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.89■□□□□ 0.61
RAD9AQ99638 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.89■□□□□ 0.61
RAD9AQ99638 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD9AQ99638 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.89■□□□□ 0.61
RAD9AQ99638 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD9AQ99638 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD9AQ99638 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RAD9AQ99638 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAD9AQ99638 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
RAD9AQ99638 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.88■□□□□ 0.61
RAD9AQ99638 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RAD9AQ99638 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAD9AQ99638 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAD9AQ99638 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAD9AQ99638 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD9AQ99638 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.88■□□□□ 0.61
RAD9AQ99638 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAD9AQ99638 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.88■□□□□ 0.61
RAD9AQ99638 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.88■□□□□ 0.61
RAD9AQ99638 OR7E47P-204ENST00000575924 449 ntBASIC18.88■□□□□ 0.61
RAD9AQ99638 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.88■□□□□ 0.61
RAD9AQ99638 AC091812.2-201ENST00000619081 385 ntBASIC18.88■□□□□ 0.61
RAD9AQ99638 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD9AQ99638 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RAD9AQ99638 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.88■□□□□ 0.61
RAD9AQ99638 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.88■□□□□ 0.61
RAD9AQ99638 AC018445.3-201ENST00000624177 1945 ntBASIC18.88■□□□□ 0.61
RAD9AQ99638 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAD9AQ99638 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD9AQ99638 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAD9AQ99638 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.87■□□□□ 0.61
RAD9AQ99638 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.87■□□□□ 0.61
RAD9AQ99638 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 AC244107.1-201ENST00000442033 332 ntBASIC18.87■□□□□ 0.61
RAD9AQ99638 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.87■□□□□ 0.61
RAD9AQ99638 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.87■□□□□ 0.61
RAD9AQ99638 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.87■□□□□ 0.61
RAD9AQ99638 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.87■□□□□ 0.61
RAD9AQ99638 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.87■□□□□ 0.61
RAD9AQ99638 AC093512.1-201ENST00000617969 520 ntBASIC18.87■□□□□ 0.61
RAD9AQ99638 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD9AQ99638 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.87■□□□□ 0.61
RAD9AQ99638 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAD9AQ99638 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RAD9AQ99638 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAD9AQ99638 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.86■□□□□ 0.61
RAD9AQ99638 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.86■□□□□ 0.61
RAD9AQ99638 AC025678.2-201ENST00000562061 970 ntBASIC18.86■□□□□ 0.61
RAD9AQ99638 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.86■□□□□ 0.61
RAD9AQ99638 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.86■□□□□ 0.61
RAD9AQ99638 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.86■□□□□ 0.61
RAD9AQ99638 AC019129.2-201ENST00000609837 1235 ntBASIC18.86■□□□□ 0.61
RAD9AQ99638 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAD9AQ99638 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RAD9AQ99638 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
RAD9AQ99638 PHGDH-209ENST00000641074 1780 ntBASIC18.86■□□□□ 0.61
RAD9AQ99638 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD9AQ99638 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RAD9AQ99638 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD9AQ99638 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.85■□□□□ 0.61
RAD9AQ99638 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD9AQ99638 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.85■□□□□ 0.61
RAD9AQ99638 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.85■□□□□ 0.61
RAD9AQ99638 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.85■□□□□ 0.61
RAD9AQ99638 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD9AQ99638 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.85■□□□□ 0.61
RAD9AQ99638 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms