Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 AC096733.2-201ENST00000609937 1394 ntBASIC14.45□□□□□ -0.1
RAB40CQ96S21 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 RPPH1-201ENST00000516869 333 ntBASIC14.44□□□□□ -0.1
RAB40CQ96S21 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40CQ96S21 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40CQ96S21 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 AC018695.7-201ENST00000624587 2492 ntBASIC14.43□□□□□ -0.1
RAB40CQ96S21 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 AC106886.4-201ENST00000623557 2502 ntBASIC14.43□□□□□ -0.1
RAB40CQ96S21 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40CQ96S21 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40CQ96S21 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms