Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.95■□□□□ 0.46
HHIPQ96QV1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.95■□□□□ 0.46
HHIPQ96QV1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.95■□□□□ 0.46
HHIPQ96QV1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 AC064836.3-201ENST00000607928 673 ntBASIC17.95■□□□□ 0.46
HHIPQ96QV1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HHIPQ96QV1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HHIPQ96QV1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.95■□□□□ 0.46
HHIPQ96QV1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HHIPQ96QV1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HHIPQ96QV1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 AC005593.1-201ENST00000624894 515 ntBASIC17.94■□□□□ 0.46
HHIPQ96QV1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HHIPQ96QV1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HHIPQ96QV1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 DNAJB3-202ENST00000449667 1266 ntBASIC17.93■□□□□ 0.46
HHIPQ96QV1 AC108751.1-201ENST00000490852 363 ntBASIC17.93■□□□□ 0.46
HHIPQ96QV1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HHIPQ96QV1 AC132938.6-201ENST00000623828 1655 ntBASIC17.93■□□□□ 0.46
HHIPQ96QV1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.93■□□□□ 0.46
HHIPQ96QV1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HHIPQ96QV1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HHIPQ96QV1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.92■□□□□ 0.46
HHIPQ96QV1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HHIPQ96QV1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HHIPQ96QV1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
HHIPQ96QV1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HHIPQ96QV1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HHIPQ96QV1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HHIPQ96QV1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HHIPQ96QV1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HHIPQ96QV1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms