Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC010947.1-201ENST00000623454 693 ntBASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 CICP6-201ENST00000457191 2729 ntBASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 FAM87A-204ENST00000613235 858 ntBASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.62■□□□□ 0.89
CHAMP1Q96JM3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 ECEL1P2-202ENST00000465689 757 ntBASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.61■□□□□ 0.89
CHAMP1Q96JM3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 TSPY14P-201ENST00000303979 915 ntBASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 MIR3917-201ENST00000580971 93 ntBASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 AC133561.5-201ENST00000635547 218 ntBASIC20.6■□□□□ 0.89
CHAMP1Q96JM3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms