Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPDL1Q96EA4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 PCDHB17P-201ENST00000539533 2393 ntBASIC17.6■□□□□ 0.41
SPDL1Q96EA4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 AC008040.2-201ENST00000461049 708 ntBASIC17.6■□□□□ 0.41
SPDL1Q96EA4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 AC026271.3-201ENST00000571884 352 ntBASIC17.6■□□□□ 0.41
SPDL1Q96EA4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 KRT16P1-201ENST00000399124 1418 ntBASIC17.6■□□□□ 0.41
SPDL1Q96EA4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPDL1Q96EA4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 MIR564-202ENST00000385049 94 ntBASIC17.59■□□□□ 0.41
SPDL1Q96EA4 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 FAM207BP-201ENST00000447172 505 ntBASIC17.59■□□□□ 0.41
SPDL1Q96EA4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 AL031985.4-201ENST00000642138 673 ntBASIC17.59■□□□□ 0.41
SPDL1Q96EA4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms