Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT9Q92600 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.42■□□□□ 0.22
CNOT9Q92600 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.42■□□□□ 0.22
CNOT9Q92600 RNF126P1-202ENST00000569893 925 ntBASIC16.42■□□□□ 0.22
CNOT9Q92600 GPR32P1-201ENST00000601788 811 ntBASIC16.42■□□□□ 0.22
CNOT9Q92600 AL355312.1-201ENST00000407115 2176 ntBASIC16.42■□□□□ 0.22
CNOT9Q92600 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CNOT9Q92600 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CNOT9Q92600 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNOT9Q92600 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.42■□□□□ 0.22
CNOT9Q92600 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CNOT9Q92600 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CNOT9Q92600 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.41■□□□□ 0.22
CNOT9Q92600 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CNOT9Q92600 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT9Q92600 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT9Q92600 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.41■□□□□ 0.22
CNOT9Q92600 KRT18P21-201ENST00000515767 1272 ntBASIC16.41■□□□□ 0.22
CNOT9Q92600 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT9Q92600 AC005332.3-201ENST00000589904 676 ntBASIC16.41■□□□□ 0.22
CNOT9Q92600 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.41■□□□□ 0.22
CNOT9Q92600 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT9Q92600 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT9Q92600 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT9Q92600 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.41■□□□□ 0.22
CNOT9Q92600 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.41■□□□□ 0.22
CNOT9Q92600 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT9Q92600 PKD1P1-201ENST00000458669 6805 ntBASIC16.4■□□□□ 0.22
CNOT9Q92600 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CNOT9Q92600 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNOT9Q92600 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 AL671277.2-201ENST00000458060 996 ntBASIC16.4■□□□□ 0.22
CNOT9Q92600 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.4■□□□□ 0.22
CNOT9Q92600 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.4■□□□□ 0.22
CNOT9Q92600 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.4■□□□□ 0.22
CNOT9Q92600 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CNOT9Q92600 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT9Q92600 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.4■□□□□ 0.22
CNOT9Q92600 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT9Q92600 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNOT9Q92600 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CNOT9Q92600 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CNOT9Q92600 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT9Q92600 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.4■□□□□ 0.22
CNOT9Q92600 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
CNOT9Q92600 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT9Q92600 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CNOT9Q92600 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CNOT9Q92600 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT9Q92600 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT9Q92600 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CNOT9Q92600 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNOT9Q92600 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT9Q92600 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNOT9Q92600 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT9Q92600 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT9Q92600 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.39■□□□□ 0.21
CNOT9Q92600 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.39■□□□□ 0.21
CNOT9Q92600 AC112698.1-201ENST00000510299 916 ntBASIC16.39■□□□□ 0.21
CNOT9Q92600 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT9Q92600 AL390719.2-201ENST00000606993 987 ntBASIC16.39■□□□□ 0.21
CNOT9Q92600 AC116407.2-201ENST00000613639 860 ntBASIC16.39■□□□□ 0.21
CNOT9Q92600 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.39■□□□□ 0.21
CNOT9Q92600 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms