Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF138Q8WVD3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF138Q8WVD3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.02■□□□□ 0.16
RNF138Q8WVD3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 AC009336.1-201ENST00000608941 1553 ntBASIC16.02■□□□□ 0.16
RNF138Q8WVD3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 PRYP5-201ENST00000451909 266 ntBASIC16.02■□□□□ 0.16
RNF138Q8WVD3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 AC008608.2-201ENST00000606089 416 ntBASIC16.02■□□□□ 0.16
RNF138Q8WVD3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 AL139288.1-201ENST00000623748 933 ntBASIC16.02■□□□□ 0.16
RNF138Q8WVD3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF138Q8WVD3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
RNF138Q8WVD3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 AC067852.2-201ENST00000590513 2313 ntBASIC16.01■□□□□ 0.15
RNF138Q8WVD3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 AL138688.1-201ENST00000624851 1594 ntBASIC16.01■□□□□ 0.15
RNF138Q8WVD3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 AL121912.1-201ENST00000603683 238 ntBASIC16.01■□□□□ 0.15
RNF138Q8WVD3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RNF138Q8WVD3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16■□□□□ 0.15
RNF138Q8WVD3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16■□□□□ 0.15
RNF138Q8WVD3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
RNF138Q8WVD3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNF138Q8WVD3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16■□□□□ 0.15
RNF138Q8WVD3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 AC004870.1-201ENST00000315132 882 ntBASIC16■□□□□ 0.15
RNF138Q8WVD3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
RNF138Q8WVD3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNF138Q8WVD3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16■□□□□ 0.15
RNF138Q8WVD3 KLF4P1-201ENST00000412782 1185 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms