Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 AC024243.1-201ENST00000609234 778 ntBASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 AC106886.4-201ENST00000623557 2502 ntBASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS4Y2Q8TD47 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 LYSMD4-203ENST00000378904 2122 ntBASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 KRT89P-201ENST00000620027 1478 ntBASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 AC009947.2-201ENST00000444014 672 ntBASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 NEK4P2-201ENST00000580004 1012 ntBASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 AP000525.1-201ENST00000608286 694 ntBASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms