Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 YBX1P2-201ENST00000489612 999 ntBASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 AC010240.3-201ENST00000607688 395 ntBASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 RNF152P1-201ENST00000397754 604 ntBASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 AC011558.1-201ENST00000623459 338 ntBASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.56■□□□□ 0.56
CCHCR1Q8TD31 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 AC104076.2-201ENST00000448912 469 ntBASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 AC034232.1-201ENST00000506026 1064 ntBASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 AC006011.2-201ENST00000621313 1158 ntBASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 AC046158.3-201ENST00000624947 2558 ntBASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 AL355312.1-201ENST00000407115 2176 ntBASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.55■□□□□ 0.56
CCHCR1Q8TD31 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 TSPY5P-201ENST00000426936 936 ntBASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 GCSHP2-201ENST00000560971 527 ntBASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 LINC01238-205ENST00000567549 1107 ntBASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 PP12613-201ENST00000424958 2230 ntBASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms