Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 AC009102.3-201ENST00000623118 1491 ntBASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 AL356309.3-201ENST00000624132 1934 ntBASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MIR564-202ENST00000385049 94 ntBASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 AC133552.2-202ENST00000575694 574 ntBASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MDK-213ENST00000617138 635 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 AC079328.2-201ENST00000561241 3354 ntBASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM11BQ8TCY0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SMIM11BQ8TCY0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms