Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 AC007967.3-201ENST00000434308 558 ntBASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 POLD2P1-201ENST00000511220 997 ntBASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHKBP1Q8TBC3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 AC012313.1-201ENST00000593393 3059 ntBASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 RPS2P28-201ENST00000314255 741 ntBASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 FAM220CP-201ENST00000395253 831 ntBASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 AC025062.2-201ENST00000605477 670 ntBASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.65■□□□□ 0.58
SHKBP1Q8TBC3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHKBP1Q8TBC3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHKBP1Q8TBC3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHKBP1Q8TBC3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.64■□□□□ 0.58
SHKBP1Q8TBC3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.64■□□□□ 0.58
SHKBP1Q8TBC3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHKBP1Q8TBC3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHKBP1Q8TBC3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHKBP1Q8TBC3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms