Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 AC026271.3-201ENST00000571884 352 ntBASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 MIR3180-5-201ENST00000583743 153 ntBASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 AL031985.4-201ENST00000642138 673 ntBASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 B3GAT3P1-201ENST00000471720 806 ntBASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 AC060834.1-201ENST00000443027 2032 ntBASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 FLJ38576-201ENST00000623820 2459 ntBASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD2Q8NHY2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 MIR4674-201ENST00000582457 87 ntBASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 MIR6786-201ENST00000616843 113 ntBASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFWD2Q8NHY2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms