Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 AL499627.1-201ENST00000569373 2188 ntBASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 AC079781.3-201ENST00000449110 356 ntBASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 LINC00896-202ENST00000609602 2128 ntBASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDND2Q8NHS1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 SIRPAP1-201ENST00000448467 1770 ntBASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 TSPY12P-201ENST00000421279 868 ntBASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 AL024508.2-201ENST00000607749 1894 ntBASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 AL353801.3-201ENST00000609898 542 ntBASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDND2Q8NHS1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms