Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 B3GAT3P1-201ENST00000471720 806 ntBASIC17.31■□□□□ 0.36
HIPK4Q8NE63 AC011506.1-201ENST00000474329 610 ntBASIC17.31■□□□□ 0.36
HIPK4Q8NE63 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 AC106886.4-201ENST00000623557 2502 ntBASIC17.31■□□□□ 0.36
HIPK4Q8NE63 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 KRT18P55-202ENST00000578578 1546 ntBASIC17.31■□□□□ 0.36
HIPK4Q8NE63 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 PCDHA14-201ENST00000506751 2298 ntBASIC17.31■□□□□ 0.36
HIPK4Q8NE63 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK4Q8NE63 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 RPPH1-201ENST00000516869 333 ntBASIC17.3■□□□□ 0.36
HIPK4Q8NE63 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK4Q8NE63 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 AP000692.2-201ENST00000608391 879 ntBASIC17.29■□□□□ 0.36
HIPK4Q8NE63 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 FSCN1P1-201ENST00000568912 1481 ntBASIC17.29■□□□□ 0.36
HIPK4Q8NE63 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms