Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 AC116562.4-202ENST00000641738 218 ntBASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 CICP6-201ENST00000457191 2729 ntBASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 RBM17P1-201ENST00000453646 1190 ntBASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 MIR3180-4-201ENST00000582223 153 ntBASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 CR769767.2-201ENST00000622735 460 ntBASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIML2Q8N7C3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 Z99916.2-201ENST00000604037 246 ntBASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIML2Q8N7C3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIML2Q8N7C3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms