Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 AC092506.1-202ENST00000401022 528 ntBASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 AC008738.7-201ENST00000609744 511 ntBASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 AC003101.2-201ENST00000612557 442 ntBASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LTBP4Q8N2S1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 GPR182-203ENST00000622922 591 ntBASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.39■■□□□ 1.5
LTBP4Q8N2S1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 MIR4453-201ENST00000584019 89 ntBASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 AL645728.2-201ENST00000641974 660 ntBASIC24.39■■□□□ 1.49
LTBP4Q8N2S1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 AC009336.1-201ENST00000608941 1553 ntBASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 ELK2AP-201ENST00000392510 1007 ntBASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 IGHV3-62-201ENST00000520057 340 ntBASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTBP4Q8N2S1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 AL138828.2-201ENST00000615812 383 ntBASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTBP4Q8N2S1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 AL353779.1-201ENST00000434793 351 ntBASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 KRT223P-202ENST00000449164 1292 ntBASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 HNRNPA3P5-201ENST00000455201 833 ntBASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 STK19B-204ENST00000512515 211 ntBASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 AC004840.1-201ENST00000636359 365 ntBASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LTBP4Q8N2S1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms