Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 AC006116.8-202ENST00000587620 1550 ntBASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 AC106028.4-201ENST00000614509 607 ntBASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 AC009093.7-201ENST00000623853 1223 ntBASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 AC011467.4-201ENST00000594891 528 ntBASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.59■□□□□ 0.25
COL27A1Q8IZC6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.58■□□□□ 0.25
COL27A1Q8IZC6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.58■□□□□ 0.25
COL27A1Q8IZC6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.58■□□□□ 0.25
COL27A1Q8IZC6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL27A1Q8IZC6 AC135776.1-201ENST00000319817 2481 ntBASIC16.58■□□□□ 0.25
COL27A1Q8IZC6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 AC002558.1-201ENST00000488906 803 ntBASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.58■□□□□ 0.24
COL27A1Q8IZC6 WIZP1-201ENST00000531444 2299 ntBASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 AC025580.3-201ENST00000617932 1424 ntBASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 PAWRP1-201ENST00000451083 565 ntBASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 AC007064.4-201ENST00000637740 555 ntBASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.57■□□□□ 0.24
COL27A1Q8IZC6 FAM8A3P-201ENST00000427218 844 ntBASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 AC023141.13-201ENST00000604991 943 ntBASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 AL096865.1-201ENST00000606796 927 ntBASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms