Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 RBM17P3-201ENST00000417687 1192 ntBASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 FGFR3P6-201ENST00000457012 610 ntBASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 AC106795.1-205ENST00000512851 1056 ntBASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 AL662844.1-201ENST00000546340 181 ntBASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 AL020996.1-203ENST00000536896 2307 ntBASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 AP005117.1-201ENST00000584346 1413 ntBASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 OR6D1P-202ENST00000641007 5290 ntBASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.73■□□□□ 0.59
SCN4BQ8IWT1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 AC116407.2-201ENST00000613639 860 ntBASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN4BQ8IWT1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms