Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.93■□□□□ 0.46
PACS2Q86VP3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 Z99916.2-201ENST00000604037 246 ntBASIC17.93■□□□□ 0.46
PACS2Q86VP3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.93■□□□□ 0.46
PACS2Q86VP3 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.93■□□□□ 0.46
PACS2Q86VP3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PACS2Q86VP3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 AC144831.1-201ENST00000573312 2656 ntBASIC17.92■□□□□ 0.46
PACS2Q86VP3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 AC233702.5-201ENST00000584107 538 ntBASIC17.92■□□□□ 0.46
PACS2Q86VP3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.92■□□□□ 0.46
PACS2Q86VP3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PACS2Q86VP3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 AP002982.1-201ENST00000492365 877 ntBASIC17.91■□□□□ 0.46
PACS2Q86VP3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.91■□□□□ 0.46
PACS2Q86VP3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms