Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.77■□□□□ 0.44
LDB1Q86U70 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.77■□□□□ 0.44
LDB1Q86U70 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.77■□□□□ 0.44
LDB1Q86U70 MTCL1P1-201ENST00000446207 792 ntBASIC17.77■□□□□ 0.44
LDB1Q86U70 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LDB1Q86U70 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.77■□□□□ 0.44
LDB1Q86U70 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.77■□□□□ 0.44
LDB1Q86U70 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LDB1Q86U70 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
LDB1Q86U70 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB1Q86U70 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LDB1Q86U70 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LDB1Q86U70 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.76■□□□□ 0.43
LDB1Q86U70 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LDB1Q86U70 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB1Q86U70 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB1Q86U70 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB1Q86U70 REXO1L11P-201ENST00000620964 1927 ntBASIC17.76■□□□□ 0.43
LDB1Q86U70 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.76■□□□□ 0.43
LDB1Q86U70 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
LDB1Q86U70 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LDB1Q86U70 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LDB1Q86U70 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LDB1Q86U70 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB1Q86U70 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LDB1Q86U70 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.75■□□□□ 0.43
LDB1Q86U70 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 AC141586.5-201ENST00000624546 2050 ntBASIC17.75■□□□□ 0.43
LDB1Q86U70 TSPY22P-201ENST00000427496 604 ntBASIC17.75■□□□□ 0.43
LDB1Q86U70 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB1Q86U70 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.75■□□□□ 0.43
LDB1Q86U70 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB1Q86U70 AL136038.3-201ENST00000561909 1096 ntBASIC17.75■□□□□ 0.43
LDB1Q86U70 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.75■□□□□ 0.43
LDB1Q86U70 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
LDB1Q86U70 AC011498.5-201ENST00000592027 486 ntBASIC17.75■□□□□ 0.43
LDB1Q86U70 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.75■□□□□ 0.43
LDB1Q86U70 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.75■□□□□ 0.43
LDB1Q86U70 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB1Q86U70 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
LDB1Q86U70 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB1Q86U70 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB1Q86U70 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LDB1Q86U70 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LDB1Q86U70 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB1Q86U70 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.74■□□□□ 0.43
LDB1Q86U70 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.74■□□□□ 0.43
LDB1Q86U70 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB1Q86U70 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB1Q86U70 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.74■□□□□ 0.43
LDB1Q86U70 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms