Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 AL139424.1-201ENST00000607572 797 ntBASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 AL691403.2-201ENST00000618460 490 ntBASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 AC108073.2-201ENST00000464002 357 ntBASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 PGM5P2-202ENST00000637225 1043 ntBASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI1Q7Z5J4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 AC023274.1-201ENST00000418278 595 ntBASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 AC135050.7-201ENST00000624508 2218 ntBASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 PRYP5-201ENST00000451909 266 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms