Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
LCA10Q71F78 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LCA10Q71F78 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC9.62□□□□□ -0.87
LCA10Q71F78 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC9.62□□□□□ -0.87
LCA10Q71F78 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC9.62□□□□□ -0.87
LCA10Q71F78 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC9.62□□□□□ -0.87
LCA10Q71F78 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
LCA10Q71F78 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC9.62□□□□□ -0.87
LCA10Q71F78 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 KRT18P5-201ENST00000436075 1291 ntBASIC9.62□□□□□ -0.87
LCA10Q71F78 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 AC087623.3-201ENST00000607047 1098 ntBASIC9.62□□□□□ -0.87
LCA10Q71F78 MIR6821-201ENST00000617625 74 ntBASIC9.62□□□□□ -0.87
LCA10Q71F78 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 AC231657.2-201ENST00000624556 255 ntBASIC9.62□□□□□ -0.87
LCA10Q71F78 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC9.62□□□□□ -0.87
LCA10Q71F78 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 NARF-204ENST00000390006 1766 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
LCA10Q71F78 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC9.62□□□□□ -0.87
LCA10Q71F78 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC9.62□□□□□ -0.87
LCA10Q71F78 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 MBP-202ENST00000355994 2772 ntTSL 5 BASIC9.62□□□□□ -0.87
LCA10Q71F78 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LCA10Q71F78 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
LCA10Q71F78 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LCA10Q71F78 KRT17P1-201ENST00000399211 1546 ntBASIC9.61□□□□□ -0.87
LCA10Q71F78 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LCA10Q71F78 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LCA10Q71F78 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LCA10Q71F78 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LCA10Q71F78 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.61□□□□□ -0.87
LCA10Q71F78 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LCA10Q71F78 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
LCA10Q71F78 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
LCA10Q71F78 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms