Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 AC007967.3-201ENST00000434308 558 ntBASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 AC091076.1-201ENST00000610741 619 ntBASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 MIR1224-201ENST00000408193 85 ntBASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 AC002558.1-201ENST00000488906 803 ntBASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 AC122714.2-201ENST00000502787 707 ntBASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
COLCA1Q6ZS62 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 AC233702.3-201ENST00000578656 1387 ntBASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 KRT18P1-202ENST00000452408 1331 ntBASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 VENTXP7-201ENST00000475503 772 ntBASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 AC091607.1-201ENST00000490318 1060 ntBASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 AC009533.2-201ENST00000543664 586 ntBASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 TPSP2-201ENST00000561760 610 ntBASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 AP005901.3-202ENST00000581653 237 ntBASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms