Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 NUS1P2-201ENST00000417358 873 ntBASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 KRT18P31-201ENST00000506277 1292 ntBASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 BNIP3P18-201ENST00000593976 575 ntBASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.53■□□□□ 0.56
RFWD3Q6PCD5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 AC091304.2-201ENST00000564639 760 ntBASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 IFNL4P1-201ENST00000607083 540 ntBASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 AL121772.3-201ENST00000610840 674 ntBASIC18.52■□□□□ 0.56
RFWD3Q6PCD5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.52■□□□□ 0.55
RFWD3Q6PCD5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 AC096582.2-201ENST00000510860 516 ntBASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFWD3Q6PCD5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms