Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 AC099398.1-201ENST00000567919 2776 ntBASIC16.21■□□□□ 0.19
NIPAL3Q6P499 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.21■□□□□ 0.19
NIPAL3Q6P499 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NIPAL3Q6P499 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
NIPAL3Q6P499 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
NIPAL3Q6P499 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
NIPAL3Q6P499 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NIPAL3Q6P499 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 LINC01311-201ENST00000565162 1445 ntBASIC16.2■□□□□ 0.18
NIPAL3Q6P499 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NIPAL3Q6P499 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 AL671277.2-201ENST00000458060 996 ntBASIC16.19■□□□□ 0.18
NIPAL3Q6P499 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 DUTP2-201ENST00000519164 463 ntBASIC16.19■□□□□ 0.18
NIPAL3Q6P499 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NIPAL3Q6P499 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NIPAL3Q6P499 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL3Q6P499 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.18■□□□□ 0.18
NIPAL3Q6P499 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL3Q6P499 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms