Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 LINC02199-201ENST00000506655 2702 ntBASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 AC093525.10-201ENST00000625130 1569 ntBASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 HMGA1P5-201ENST00000412453 271 ntBASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 AC133561.5-201ENST00000635547 218 ntBASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 Z98044.1-201ENST00000632503 1764 ntBASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TMEM53Q6P2H8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 ECEL1P2-202ENST00000465689 757 ntBASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 AC145285.6-201ENST00000604632 637 ntBASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 MYC-208ENST00000641036 567 ntBASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 LINC02228-204ENST00000642115 2962 ntBASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM53Q6P2H8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM53Q6P2H8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms